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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_277179_277422_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
277179 - 277422

Intron Length:
244

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGGCAG

5'SS Class:
strong_major

3'SS Sequence:
TCCGCTGCACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAT

U12 Branch Point Sequence:
CTCCGCTGCACC

Flanking Amino Acid:
ERSLESFIREGSEIDVIGVG

Intron Amino Acid Position:
355

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83
0.78
0.9
65.6
41.7

Major BPS
76.2
0.65
1.1
65.3
43.7

Major PPT
62.6
0.28
1
54.5
40.2

Minor 5ss
24.7
-2.9
3
28.6
43.8

Minor BPS
42.2
-0.6
2.2
52.11
45.1

Associated Gene:

Gene:
NAPRT

Ensembl Gene ID:

Chromosome:
PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

276225 - 279505
3281

275965 - 279505
3541