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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_277508_277712_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
277508 - 277712

Intron Length:
205

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGC|GTGAGTCCC

5'SS Class:
major

3'SS Sequence:
TTTCCTTTTCCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCCTCAC

U12 Branch Point Sequence:
AGCTCCTCACTT

Flanking Amino Acid:
IRRVLRACGTAFQVPWFGSI

Intron Amino Acid Position:
326

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.2
0.31
1.3
56.7
42.7

Major BPS
72.4
0.56
1
73.5
32.5

Major PPT
91.4
0.93
0.6
84.4
30.5

Minor 5ss
31
-2.2
2.8
32.6
34.4

Minor BPS
50.5
0.09
1.8
67.23
43.8

Associated Gene:

Gene:
NAPRT

Ensembl Gene ID:

Chromosome:
PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

276225 - 279505
3281

275965 - 279505
3541