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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_287199_288046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

287199 - 288046

Intron Length:

848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

GTGCCTTTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAA

U12 Branch Point Sequence:

GAACGTTTAAAG

Flanking Amino Acid:

KSSILLDVKPWDDETDMAKM

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

74.4

37.7

Major BPS

72.6

0.56

1.2

75.9

36.3

Major PPT

78.8

0.65

0.9

72.7

37.5

Minor 5ss

30.1

-2.3

2.6

34.2

41.4

Minor BPS

45.1

-0.5

1.8

45.24

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029719

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024017

286134 - 293887

7754

ENSAPLT00000033790

286134 - 299402

13269

ENSAPLT00000021153

286134 - 299402

13269

ENSAPLT00000033617

286134 - 297013

10880

ENSAPLT00000020699

286134 - 299402

13269

ENSAPLT00000032182

286134 - 296452

10319

ENSAPLT00000041072

286134 - 297013

10880

ENSAPLT00000026840

286134 - 297013

10880

ENSAPLT00000034423

286134 - 297013

10880