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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_288241_291998_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

288241 - 291998

Intron Length:

3758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGCAG

5'SS Class:

major

3'SS Sequence:

AGGTGCAGGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TGCTTCTCACAT

Flanking Amino Acid:

SAAAGSAFFAGQGSPQAEPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

58.9

41.6

Major BPS

0.87

0.8

85.6

Major PPT

48.3

-0

1.2

36.6

44.5

Minor 5ss

-3

3.1

28.6

43.8

Minor BPS

47.4

-0.1

1.9

65.7

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016463

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021905

287149 - 292057

4909