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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_289217_289398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

289217 - 289398

Intron Length:

182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

TCCCCCCTCACC

Flanking Amino Acid:

LEVENQNLRSVVADLQMAIF

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.5

41.9

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

81.2

0.7

75.5

26.5

Minor 5ss

35.3

-1.7

2.7

39.4

40.3

Minor BPS

47.9

-0.1

2.1

60.5

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029719

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024017

286134 - 293887

7754

ENSAPLT00000033790

286134 - 299402

13269

ENSAPLT00000021153

286134 - 299402

13269

ENSAPLT00000033617

286134 - 297013

10880

ENSAPLT00000020699

286134 - 299402

13269

ENSAPLT00000032182

286134 - 296452

10319

ENSAPLT00000041072

286134 - 297013

10880

ENSAPLT00000026840

286134 - 297013

10880

ENSAPLT00000034423

286134 - 297013

10880