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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_289493_289775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

289493 - 289775

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTCATCTCAATT

Flanking Amino Acid:

SLRGTKGRTGSASTTSSGPG

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.5

37.3

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

84.5

0.78

0.8

79.8

32.1

Minor 5ss

32.6

-2

3.4

40.6

45.1

Minor BPS

61.1

0.43

1.6

76.38

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029719

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024017

286134 - 293887

7754

ENSAPLT00000021153

286134 - 299402

13269

ENSAPLT00000020699

286134 - 299402

13269

ENSAPLT00000041072

286134 - 297013

10880

ENSAPLT00000032182

286134 - 296452

10319