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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_289493_292768_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

289493 - 292768

Intron Length:

3276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGCATTTC

5'SS Class:

weak_major

3'SS Sequence:

TTCCTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TTCATCTCAATT

Flanking Amino Acid:

KLDLGRNSSASASTTSSGPG

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.1

56.1

37.8

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

84.5

0.78

0.8

79.8

32.1

Minor 5ss

40.5

-1.1

3.3

44.1

Minor BPS

61.1

0.43

1.6

76.38

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029719

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026840

286134 - 297013

10880