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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_290383_292768_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

290383 - 292768

Intron Length:

2386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGCATTTC

5'SS Class:

weak_major

3'SS Sequence:

TTGCCCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGTTGAA

U12 Branch Point Sequence:

CCTCGTTGAACC

Flanking Amino Acid:

KLDLGRNSSAQKTAPRSKEA

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.1

56.1

37.8

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

81.6

0.71

0.8

73.1

37.2

Minor 5ss

40.5

-1.1

3.3

44.1

Minor BPS

47.1

-0.2

1.9

56.01

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029719

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024017

286134 - 293887

7754