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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011606.1_1118_5855_F

Intron Information:

Intron Rank:

132357

Intron Class:

major

Intron Phase:

Intron Coordinates:

1118 - 5855

Intron Length:

4738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCCT

5'SS Class:

major

3'SS Sequence:

TCCTGCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

CCCTCCTGAGCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.2

66.5

44.9

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

81.1

0.7

0.8

72.3

37.8

Minor 5ss

41.3

-1

3.1

60.4

43.9

Minor BPS

54.1

0.21

1.8

68.42

48.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021113

Chromosome:

PEDO01011606.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027921

21 - 6192

6172