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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011608.1_2393_2733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2393 - 2733

Intron Length:

341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CGTGCCCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

GGGTCCGTGCCC

Flanking Amino Acid:

SFKFINKMQLSDSVCYVKAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

54.4

0.11

1.2

36.4

Major PPT

68.2

0.41

0.9

57.8

38.5

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

36.8

-1

3.7

54.91

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022959

Chromosome:

PEDO01011608.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030600

21 - 5871

5851