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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011664.1_1021_1560_R

Intron Information:

Intron Rank:

136660

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1021 - 1560

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

GATCTGGATCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CTGCCCTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

42.1

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

49.9

-0

1.2

45.4

Minor 5ss

32.1

-2

3.1

40.4

45.5

Minor BPS

67.7

0.42

1.4

64.52

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020969

Chromosome:

PEDO01011664.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030594

21 - 2075

2055