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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011711.1_13272_14176_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
13272 - 14176

Intron Length:
905

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGTATG

5'SS Class:
strong_major

3'SS Sequence:
TCTATTTCTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTTAT

U12 Branch Point Sequence:
TTTTATTTGATA

Flanking Amino Acid:
ENYDDFVKAIGLPGEKVEMG

Intron Amino Acid Position:
45

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.7
0.93
0.8
83.5
35

Major BPS
87.7
0.94
0.8
77.7
36.7

Major PPT
75.1
0.57
1
79.4
32.8

Minor 5ss
39.5
-1.2
2.8
48.4
41.7

Minor BPS
68.3
0.57
1.4
78.88
30.8

Associated Gene:

Gene:
FABP6

Ensembl Gene ID:

Chromosome:
PEDO01011711.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8074 - 17563
9490

12429 - 17563
5135