Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011751.1_1428_1493_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1428 - 1493

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCTG

5'SS Class:

strong_major

3'SS Sequence:

CACCCTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

ACCTGCTGACCA

Flanking Amino Acid:

LSEDFLEAFQVVVLTESPLE

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

68.8

43.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

63.1

0.3

56.6

38.4

Minor 5ss

-1.6

3.2

46.7

48.6

Minor BPS

44.8

-0.4

2.1

53.95

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028354

Chromosome:

PEDO01011751.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022291

449 - 3468

3020