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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011815.1_4490_5852_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4490 - 5852

Intron Length:

1363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTCTCAAAT

Flanking Amino Acid:

GVKFVKKPDDGKMKGLAFVQ

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

77.2

37.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.5

0.53

0.9

71.3

33.5

Minor 5ss

-1.3

3.3

54.4

43.7

Minor BPS

71.4

0.75

1.6

89.47

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026602

Chromosome:

PEDO01011815.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043264

498 - 6303

5806