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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011848.1_776_1008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

776 - 1008

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

CATGCCTGACCC

Flanking Amino Acid:

PTITQIINHIDALLKKPEVQ

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.8

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

0.61

0.8

68.8

37.2

Minor 5ss

29.4

-2.4

3.2

40.8

45.4

Minor BPS

-0

1.9

60.14

44.8

Associated Gene:

Gene:

HSPA12B

Ensembl Gene ID:

ENSAPLG00000006317

Chromosome:

PEDO01011848.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024698

21 - 2006

1986

ENSAPLT00000006542

114 - 1989

1876