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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011890.1_53589_57689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53589 - 57689

Intron Length:

4101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TGATTTGTGACT

Flanking Amino Acid:

HVEELQIHISRLECSKKDWE

Intron Amino Acid Position:

2168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

78.6

0.71

79.6

32.9

Major PPT

86.2

0.81

0.8

83.9

31.1

Minor 5ss

-2.2

3.2

38.7

46.6

Minor BPS

49.9

0.07

71.54

39.8

Associated Gene:

Gene:

GOLGB1

Ensembl Gene ID:

ENSAPLG00000009442

Chromosome:

PEDO01011890.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009877

19582 - 67087

47506