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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011890.1_59641_65715_F


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
59641 - 65715

Intron Length:
6075

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTA|GTACGTCCT

5'SS Class:
major

3'SS Sequence:
TGGTGCTTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGCAT

U12 Branch Point Sequence:
TTCCTGGTAATT

Flanking Amino Acid:
SSLQNDRDRLTREDDLGKAD

Intron Amino Acid Position:
2819

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.5
0.41
1.1
61.9
42.5

Major BPS
75
0.62
1.4
85.7
34.9

Major PPT
76.3
0.59
1
69.4
41.7

Minor 5ss
37.6
-1.4
3.2
52.6
39.1

Minor BPS
44.5
-0.3
2.5
68.07
43.7

Associated Gene:

Gene:
GOLGB1

Ensembl Gene ID:

Chromosome:
PEDO01011890.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19582 - 67087
47506