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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011892.1_1296_1526_F

Intron Information:

Intron Rank:

127682

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1296 - 1526

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AT

5'SS Sequence:

CAT|GTCCATCTA

5'SS Class:

weak_major

3'SS Sequence:

CTCTGTACCCCAT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CCCTCTGTACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.2

0.01

1.4

55.4

43.5

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

40.5

-0.5

3.1

54.3

40.2

Minor 5ss

33.9

-1.8

3.3

45.3

Minor BPS

44.5

-0.4

2.2

52.59

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018843

Chromosome:

PEDO01011892.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029618

21 - 1659

1639