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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011903.1_2250_2457_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2250 - 2457

Intron Length:

208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TTCTGCTGACAG

Flanking Amino Acid:

LKNELERDSKIVVPPLPGKA

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

87.1

0.83

0.8

84.6

30.3

Minor 5ss

32.6

-2

3.2

41.8

45.1

Minor BPS

43.6

-0.6

2.2

53.15

47.2

Associated Gene:

Gene:

SNX12

Ensembl Gene ID:

ENSAPLG00000014548

Chromosome:

PEDO01011903.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015163

21 - 4175

4155