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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011946.1_2752_2936_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2752 - 2936

Intron Length:
185

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTCAGTCAT

5'SS Class:
strong_major

3'SS Sequence:
CCCCCCTTTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCGCAC

U12 Branch Point Sequence:
CTCTCCGCACCT

Flanking Amino Acid:
AAGTQGWGDRGYGHAAPSTD

Intron Amino Acid Position:
70

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.1
0.73
1.2
77.9
38.6

Major BPS
49
-0
1.4
59.2
39.1

Major PPT
74.7
0.56
0.7
72.1
26

Minor 5ss
31.3
-2.1
2.9
41.4
45

Minor BPS
45.1
-0.2
2.4
67.41
49.1

Associated Gene:

Gene:
KCNK3

Ensembl Gene ID:

Chromosome:
PEDO01011946.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

820 - 3832
3013