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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011947.1_3022_3175_R

Intron Information:

Intron Rank:

128886

Intron Class:

major

Intron Phase:

Intron Coordinates:

3022 - 3175

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAACAT

U12 Branch Point Sequence:

TGTGCCTGACGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

48.2

-0.1

1.2

55.4

40.4

Major PPT

82.4

0.73

0.7

76.9

25.1

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

46.3

-0.2

2.1

60.68

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016481

Chromosome:

PEDO01011947.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018176

1388 - 3284

1897