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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011988.1_1049_1588_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1049 - 1588

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCTCT

5'SS Class:

major

3'SS Sequence:

AAGGAAGTTATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAAAAAT

U12 Branch Point Sequence:

ATGTCCCTAAAG

Flanking Amino Acid:

ETIKGLAGPWGRISEAGCPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

68.4

39.3

Major BPS

50.5

0.01

1.1

57.3

34.4

Major PPT

50.1

1.1

39.9

Minor 5ss

40.6

-1

48.7

Minor BPS

56.8

0.08

1.9

64.2

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006361

Chromosome:

PEDO01011988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027267

878 - 3464

2587