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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011988.1_2705_3109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2705 - 3109

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCAAA

U12 Branch Point Sequence:

GGTGCCAAACCC

Flanking Amino Acid:

YANFSVPVVKNAALFWWNLR

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

-0

1.3

56.7

38.7

Major PPT

0.49

0.8

65.4

30.5

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

41.6

-0.6

2.1

52.6

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006361

Chromosome:

PEDO01011988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027267

878 - 3464

2587

ENSAPLT00000021858

21 - 3449

3429

ENSAPLT00000006596

21 - 3449

3429