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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011988.1_3216_3435_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3216 - 3435

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTGGGGTGA

5'SS Class:

weak_major

3'SS Sequence:

GGCGGCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTGGAT

U12 Branch Point Sequence:

CGGGCAGGAATT

Flanking Amino Acid:

VLAGDKWGETSAIPGTEEDV

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.1

48.4

38.5

Major BPS

-0

1.5

48.8

46.3

Major PPT

60.6

0.24

50.7

39.3

Minor 5ss

31.8

-2.1

3.5

42.2

46.3

Minor BPS

37.9

-0.8

2.2

50.17

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006361

Chromosome:

PEDO01011988.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027267

878 - 3464

2587