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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012035.1_3558_3728_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3558 - 3728

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCCTGAG

5'SS Class:

weak_major

3'SS Sequence:

CTACGCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

GTGCTTTTACCC

Flanking Amino Acid:

SPTPPSQCHQSLNQTALGMA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.5

54.3

Major BPS

74.2

0.6

39.4

Major PPT

70.1

0.45

0.9

62.2

34.4

Minor 5ss

31.9

-2.1

3.2

40.7

45.6

Minor BPS

50.8

1.6

59.6

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015135

Chromosome:

PEDO01012035.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015783

3299 - 11733

8435