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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012040.1_180474_187337_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

180474 - 187337

Intron Length:

6864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTTTT

5'SS Class:

strong_major

3'SS Sequence:

AAATCAGGTGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTGTTTTTAAAT

Flanking Amino Acid:

RKIVWKDGQKVPPMRWIVNF

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

85.8

25.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

47.8

-0.1

1.2

42.5

41.5

Minor 5ss

40.8

-1

58.4

46.2

Minor BPS

65.8

0.57

1.4

76.07

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008241

Chromosome:

PEDO01012040.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025501

166818 - 188584

21767