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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012040.1_187832_188287_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

187832 - 188287

Intron Length:

456

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCTATGCAC

5'SS Class:

weak_major

3'SS Sequence:

TGGTGGCATTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATATATATAAAT

Flanking Amino Acid:

FLHNCLILVNVTLSKSCTLM

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.5

50.7

43.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

59.6

0.22

1.1

55.6

44.9

Minor 5ss

19.6

-3.5

3.8

30.4

35.5

Minor BPS

49.3

0.03

1.8

71.01

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008241

Chromosome:

PEDO01012040.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025501

166818 - 188584

21767