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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012040.1_48088_50555_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

48088 - 50555

Intron Length:

2468

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAT|GCACGCTGT

5'SS Class:

major

3'SS Sequence:

TTCAATCCTGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ACTTTCTGATCA

Flanking Amino Acid:

LHNCLILVNAIINGVFLCIF

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.4

58.8

45.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

54.5

0.1

1.7

62.3

39.4

Minor 5ss

36.6

-1.5

4.3

59.2

45.8

Minor BPS

54.7

0.14

1.7

66.1

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017102

Chromosome:

PEDO01012040.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008547

47952 - 71711

23760