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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012065.1_1517_1902_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1517 - 1902

Intron Length:
386

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGCTGG

5'SS Class:
strong_major

3'SS Sequence:
TTGGGTGTTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATGAAA

U12 Branch Point Sequence:
GGGCCGCTGACT

Flanking Amino Acid:
CDSCGHRTNEVKSGGAIEPQ

Intron Amino Acid Position:
70

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83
0.78
0.9
65.8
42.7

Major BPS
57.6
0.19
1.3
67.9
36.3

Major PPT
68.1
0.41
1
61.8
44.4

Minor 5ss
37.8
-1.4
3
46.8
48.5

Minor BPS
42.9
-0.4
2.3
59.29
43.6

Associated Gene:

Gene:
ZPR1

Ensembl Gene ID:

Chromosome:
PEDO01012065.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2923
2903

21 - 2923
2903