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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012065.1_1974_2171_R


Intron Information:

Intron Rank:
4

Intron Class:
minor

Intron Phase:
1

Intron Coordinates:
1974 - 2171

Intron Length:
198

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGC|GTATCCTGT

5'SS Class:
minor

3'SS Sequence:
CTGCCTGCTCCAG|A

3'SS Class:
strong_BPS

U2 Branch Point Sequence:
TGTTGAA

U12 Branch Point Sequence:
TTTTCCTTGACT

Flanking Amino Acid:
APANTNMKLVQIPHFKEVII

Intron Amino Acid Position:
46

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
46.8
-0.2
1.4
44.1
46

Major BPS
72
0.55
1.1
63.4
44.3

Major PPT
70.9
0.47
0.9
61.4
40

Minor 5ss
78.4
0.96
1.7
76.5
39.5

Minor BPS
94.4
1.48
0.6
103.7
17.4

Associated Gene:

Gene:
ZPR1

Ensembl Gene ID:

Chromosome:
PEDO01012065.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2923
2903

21 - 2923
2903