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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012065.1_2239_2338_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2239 - 2338

Intron Length:
100

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGGGTGAC

5'SS Class:
strong_major

3'SS Sequence:
TCCTTTGATCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTGAT

U12 Branch Point Sequence:
TGCTCCCTGACT

Flanking Amino Acid:
ADSVEDLRNEVLQFNTNCPE

Intron Amino Acid Position:
24

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.6
0.75
0.9
71.9
33.8

Major BPS
84
0.85
0.9
75
39.9

Major PPT
72.1
0.5
0.9
65.6
40.2

Minor 5ss
26.1
-2.7
3.2
33.4
42.6

Minor BPS
65.8
0.58
1.7
81.14
40.4

Associated Gene:

Gene:
ZPR1

Ensembl Gene ID:

Chromosome:
PEDO01012065.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2923
2903

21 - 2923
2903