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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012065.1_2393_2585_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2393 - 2585

Intron Length:
193

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAATATGG

5'SS Class:
major

3'SS Sequence:
TGTCCTGTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGTTAAT

U12 Branch Point Sequence:
TAGCAGTTAATG

Flanking Amino Acid:
MLGIEGEELDEKPAD

Intron Amino Acid Position:
6

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.8
0.68
1
65.3
41.4

Major BPS
75.6
0.64
1.1
75.7
36.5

Major PPT
78.8
0.65
0.9
72.7
37.5

Minor 5ss
37.4
-1.4
3
48.1
47.4

Minor BPS
45.2
-0.5
2.2
50.98
43.2

Associated Gene:

Gene:
ZPR1

Ensembl Gene ID:

Chromosome:
PEDO01012065.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2923
2903

21 - 2923
2903