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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012078.1_1338_3284_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1338 - 3284

Intron Length:

1947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGAGGCGA

5'SS Class:

weak_major

3'SS Sequence:

TGTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGTAT

U12 Branch Point Sequence:

AAGTTGGTATCT

Flanking Amino Acid:

GAAPRQNVSLPFKLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.3

47.9

44.1

Major BPS

56.4

0.16

1.6

57.4

49.1

Major PPT

93.4

0.98

0.7

92.3

26.6

Minor 5ss

26.5

-2.7

3.2

33.9

41.9

Minor BPS

39.4

-0.7

2.6

58.46

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018199

Chromosome:

PEDO01012078.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035239

1322 - 3466

2145