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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012108.1_2322_2862_R

Intron Information:

Intron Rank:

154627

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2322 - 2862

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTATGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

GTTTCCTTATGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.6

29.9

Major BPS

77.9

0.69

78.3

31.3

Major PPT

57.6

0.17

1.2

60.1

38.7

Minor 5ss

38.7

-1.3

2.7

47.6

34.4

Minor BPS

63.8

0.43

1.9

76.09

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030773

Chromosome:

PEDO01012108.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029470

1896 - 4613

2718