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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012108.1_2993_3464_R

Intron Information:

Intron Rank:

154624

Intron Class:

major

Intron Phase:

Intron Coordinates:

2993 - 3464

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTCCTGGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

82.7

0.74

0.8

80.8

30.4

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

76.7

0.92

1.3

92.05

30.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030773

Chromosome:

PEDO01012108.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029470

1896 - 4613

2718

ENSAPLT00000017620

569 - 4643

4075