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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012108.1_9139_9228_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9139 - 9228

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAGAT

U12 Branch Point Sequence:

TATGCAATGATT

Flanking Amino Acid:

YYHDETVSTIRDISVEEDLS

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

70.4

0.51

66.8

39.9

Major PPT

0.72

0.9

75.8

38.2

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

47.7

-0.1

70.17

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002281

Chromosome:

PEDO01012108.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002412

8084 - 10939

2856

ENSAPLT00000036222

7429 - 12359

4931