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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012112.1_72351_79520_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

72351 - 79520

Intron Length:

7170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCATTGTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTCCCTTTCATT

Flanking Amino Acid:

RIGFLRLTFYGPTWQVQDKA

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

73.2

39.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

69.5

0.44

1.1

70.7

38.8

Minor 5ss

40.1

-1.1

2.8

44.4

43.5

Minor BPS

59.2

0.37

1.7

76.64

40.8

Associated Gene:

Gene:

BBOX1

Ensembl Gene ID:

ENSAPLG00000002936

Chromosome:

PEDO01012112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002993

48598 - 84234

35637