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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012112.1_79627_81001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79627 - 81001

Intron Length:

1375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGACAA

5'SS Class:

strong_major

3'SS Sequence:

CAACTCGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GAGATCTCAACT

Flanking Amino Acid:

DYPVLQHPPGVQFLHCIKQT

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

67.8

39.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

65.7

0.35

57.4

38.1

Minor 5ss

30.8

-2.2

31.1

42.4

Minor BPS

54.3

0.21

1.6

67.01

43.1

Associated Gene:

Gene:

BBOX1

Ensembl Gene ID:

ENSAPLG00000002936

Chromosome:

PEDO01012112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002993

48598 - 84234

35637