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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012112.1_81199_81991_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81199 - 81991

Intron Length:

793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

CTCTGTTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

CTCTGTTTCACA

Flanking Amino Acid:

FAVQCKQRIIDVDYRGQVVR

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

40.1

Major BPS

66.1

0.4

31.5

Major PPT

80.2

0.68

0.8

74.8

33.6

Minor 5ss

31.9

-2.1

2.7

33.3

35.4

Minor BPS

48.2

-0.1

2.2

61.93

45.1

Associated Gene:

Gene:

BBOX1

Ensembl Gene ID:

ENSAPLG00000002936

Chromosome:

PEDO01012112.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002993

48598 - 84234

35637