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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012142.1_1158_1638_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1158 - 1638

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCCATGATC

5'SS Class:

major

3'SS Sequence:

AGAAAGTAGAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTATGAT

U12 Branch Point Sequence:

GATCAGTGAATT

Flanking Amino Acid:

FNMQEFLARVGLERGQRDWK

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.3

38.4

Major BPS

72.3

0.55

1.1

63.4

42.8

Major PPT

38.8

-0.6

1.7

27.9

40.7

Minor 5ss

22.1

-3.2

3.8

31.8

36.2

Minor BPS

43.6

-0.4

2.2

61.86

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006635

Chromosome:

PEDO01012142.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006875

668 - 1757

1090