Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012158.1_1064_1204_R

Intron Information:

Intron Rank:

133146

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1064 - 1204

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

GAG|GTGGCCAAC

5'SS Class:

major

3'SS Sequence:

ATGGTCATCGGGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

TGGTCAAGAGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.8

0.3

1.2

59.3

41.8

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

30.1

-1.1

3.3

43.9

41.7

Minor 5ss

38.4

-1.3

3.1

50.7

46.2

Minor BPS

41.5

-0.5

60.28

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018880

Chromosome:

PEDO01012158.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021247

21 - 1671

1651