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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012174.1_1199_1530_R

Intron Information:

Intron Rank:

142037

Intron Class:

major

Intron Phase:

Intron Coordinates:

1199 - 1530

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAC

U12 Branch Point Sequence:

CTGATCTTAGTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

67.1

0.43

1.2

69.3

37.7

Major PPT

82.9

0.74

0.7

77.4

24.6

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

50.6

-0

1.6

58.11

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023743

Chromosome:

PEDO01012174.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046433

76 - 2239

2164