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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012187.1_299_410_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

299 - 410

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGGGGA

5'SS Class:

major

3'SS Sequence:

CAGGGACGCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

ACACGCTCAGCC

Flanking Amino Acid:

AQAQLGGDRPRSYEELSAIC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

55.5

43.7

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

49.3

-0

1.1

39.3

38.9

Minor 5ss

-2.5

3.6

37.3

47.4

Minor BPS

41.5

-0.6

47.62

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024788

Chromosome:

PEDO01012187.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032225

21 - 2152

2132