Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012187.1_486_943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

486 - 943

Intron Length:

458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTCCC

5'SS Class:

major

3'SS Sequence:

ATGTCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TGTCCCCTGATG

Flanking Amino Acid:

YSASRQLLFQDTPQDTTPRR

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.3

62.4

42.4

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

0.43

0.9

59.3

37.5

Minor 5ss

-1.5

2.7

45.9

42.2

Minor BPS

53.1

-0

1.8

61.99

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024788

Chromosome:

PEDO01012187.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032225

21 - 2152

2132