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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012222.1_16996_25017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

16996 - 25017

Intron Length:

8022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TGTCTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

CACAGCTCACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

68.7

Major BPS

0.28

1.1

63.1

35.8

Major PPT

82.6

0.73

0.8

73.6

36.9

Minor 5ss

39.8

-1.1

3.1

61.7

42.2

Minor BPS

39.9

-0.7

2.1

45.03

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025874

Chromosome:

PEDO01012222.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029810

13623 - 25218

11596