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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012237.1_13127_26058_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
13127 - 26058

Intron Length:
12932

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTACAGTAA

5'SS Class:
major

3'SS Sequence:
TTGACTTCTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAC

U12 Branch Point Sequence:
TTCATTTTGACT

Flanking Amino Acid:
VVSPETTGTLEKLEVAPPSP

Intron Amino Acid Position:
155

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.8
0.33
1.1
58.1
37.2

Major BPS
86.5
0.91
0.8
77.4
37.4

Major PPT
74.4
0.55
0.9
66.5
40.5

Minor 5ss
34.5
-1.8
3.5
43
46.5

Minor BPS
66.1
0.59
1.3
78.85
37.8

Associated Gene:

Gene:
TMEM65

Ensembl Gene ID:

Chromosome:
PEDO01012237.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

5400 - 35406
30007