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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012237.1_31842_33258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31842 - 33258

Intron Length:

1417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTATGTCTG

5'SS Class:

major

3'SS Sequence:

TGTTTTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

CCTTTCAGATCC

Flanking Amino Acid:

GNLVSDLAGLGLAGYVEALA

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

65.3

Major BPS

74.1

0.6

38.9

Major PPT

88.9

0.88

0.7

81.2

36.5

Minor 5ss

43.5

-0.7

2.8

50.1

46.1

Minor BPS

44.6

-0.4

1.9

55.36

Associated Gene:

Gene:

TMEM65

Ensembl Gene ID:

ENSAPLG00000029016

Chromosome:

PEDO01012237.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043695

5400 - 35406

30007

ENSAPLT00000043402

5400 - 35382

29983

ENSAPLT00000028665

5400 - 35406

30007