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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012238.1_156722_157893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156722 - 157893

Intron Length:

1172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCCA

5'SS Class:

major

3'SS Sequence:

TTCCCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

AGCTCTGCATTT

Flanking Amino Acid:

HPEPVIRFHKAAFLGQRGLT

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

63.4

42.7

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

81.3

0.7

0.8

32.5

Minor 5ss

-2.3

3.4

39.7

45.8

Minor BPS

-0.6

2.2

54.63

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029465

Chromosome:

PEDO01012238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017547

153395 - 171950

18556