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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012238.1_160340_161355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

160340 - 161355

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

GATTTCACAGCT

Flanking Amino Acid:

LLALMFPLKYSFTYVPILPA

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.4

30.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

86.4

0.82

0.8

80.9

31.1

Minor 5ss

23.1

-3.1

3.2

Minor BPS

46.3

-0.2

67.44

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029465

Chromosome:

PEDO01012238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017547

153395 - 171950

18556