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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01012238.1_162054_164711_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

162054 - 164711

Intron Length:

2658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACGCAT

U12 Branch Point Sequence:

AAGCCCCGGACG

Flanking Amino Acid:

CTIPITGGAQRTISLGAGDR

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

69.2

38.5

Major BPS

47.8

-0.1

1.5

57.3

41.7

Major PPT

86.3

0.82

0.8

80.6

31.4

Minor 5ss

33.7

-1.9

3.1

43.4

44.3

Minor BPS

43.5

-0.6

1.8

45.26

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029465

Chromosome:

PEDO01012238.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017547

153395 - 171950

18556